As specified from Java EE 6 specifications, the relevant specifications are the following:
Java Platform, Enterprise Edition 6 Specification
Java EE Application Deployment JSR 88 Specification
Common Annotations for the Java Platform 1.6 Specification
Java Servlet 3.0 Specification
Enterprise JavaBeans 3.1 Specification
Java EE Connector Architecture 1.6 Specification
The following product documentation might be relevant to some aspects of application deployment:
Oracle GlassFish Server 3.0.1 Add-On Component Development Guide
GlassFish Server Administration Console online help