Skip Headers
Oracle® Life Sciences Data Hub Installation Guide
Release 2.2

Part Number E22743-06
Go to Documentation Home
Home
Go to Book List
Book List
Go to Table of Contents
Contents
Go to Feedback page
Contact Us

Go to previous page
Previous
Go to next page
Next
View PDF

A Architecture Overview

This section contains the following topics:

Figure A-1 shows the logical Oracle LSH architecture that is described in the following sections.

Figure A-1 Oracle LSH Architecture

Description of Figure A-1 follows
Description of "Figure A-1 Oracle LSH Architecture"

Client Tier

There are two ways to set up a client, depending on the type of user:

Consumers and Administrators Oracle LSH Consumers, who retrieve information in the form of reports and visualizations, and Oracle LSH Administrators, who perform administrative tasks within Oracle LSH, require the following on their personal computers:

Administrators require either JInitiator or JVM to use any of the Oracle Forms screens related to security, to run the post-installation jobs, and to set up user accounts and functional roles.

Definers A full-service client for users who create (define) the programs that operate on Oracle LSH data and generate reports requires additional software:

Application Tier

In addition to standard Oracle Applications components, Oracle LSH's application tier includes the following:

Oracle LSH Application Server The Oracle LSH Application Server renders the user interface using the Oracle Applications Framework and handles the communication between the user interface and the database using the Java Runtime Environment.

Oracle LSH Distributed Processing (DP) Server The Oracle LSH DP Server handles the communication between Oracle LSH and the external processing systems required to support the IDEs.

Processing Systems XML Publisher is required for internal Oracle LSH processing. The other systems are required only if you are developing Oracle LSH Programs in those technologies:

Database Tier

The Oracle LSH database tier includes the following:

Adapters to External Systems

Oracle LSH is intended for integration with other systems for a variety of purposes. Each external system integrated with Oracle LSH requires an adapter to handle whatever communication and exchange is required, depending on the purpose of the integration and the technical specifications of the external system. Oracle LSH is shipped with built-in adapters for loading data into Oracle LSH from other systems, for developing and executing programs operating on Oracle LSH data, and for exporting data out of Oracle LSH.

Figure A-2 shows the adapters that are included with Oracle LSH. Adapters to other systems may be available from third parties.

Figure A-2 Oracle LSH Adapters by Functionality

Description of Figure A-2 follows
Description of "Figure A-2 Oracle LSH Adapters by Functionality"

Source Data Systems

LSH includes adapters to external systems from which you can load data into Oracle LSH:

  • SAS. The SAS adapter allows you to load SAS data sets into Oracle LSH.

  • Text. The Text adapter allows you to load text files from any system into Oracle LSH.

  • Oracle Databases. The general Oracle Databases adapter allows you to load data from any Oracle database into Oracle LSH.

  • Oracle Clinical. The Oracle Clinical adapter family includes eight specialized adapters for loading the following data and metadata from Oracle Clinical:

    • Data Extract SAS Views

    • Data Extract Oracle Views

    • Global Library

    • Labs

    • Study Data

    • Study Design and Definition

    • Stable Interface Tables

    • Randomization

Data Transformation and Reporting Tools

Oracle LSH includes adapters to set up the following systems as integrated development environments (IDEs) for developing and generating programs:

  • SAS

  • PL/SQL

  • Informatica PowerCenter

  • Oracle Reports

  • Oracle Business Intelligence Publisher

Visualization Tools

Oracle LSH includes adapters to allow the following systems to display visualizations of Oracle LSH data:

  • Oracle Business Intelligence Enterprise Edition (OBIEE) Answers

  • Oracle Clinical Development Analytics—to view visualizations in OBIEE Answers of Oracle Clinical data in Oracle LSH

  • Generic Visualization Adapter—to integrate other visualization tools

Data Export Tools

Oracle LSH includes adapters to allow exporting Oracle LSH data:

  • Oracle Export

  • SAS—Transport Files and Data Sets

  • Text Files