Retrieve Intron Components for a Gene Identifier
get
/ohfapi/cg/v3.3/genes/{id}/components/intron
This endpoint supports the retrieval of intron Components for a Gene Row ID passed. It returns all intron Component information like Gene Name, Ensembl Version, Transcript Identifier, Component Name, Component Identifier, Genomic Positions, Strand and other Intron Component associated information. The 'Count' value displayed in the API represents the count of unique Gene Structure Identifiers
Request
Supported Media Types
- application/json
- application/xml
Path Parameters
-
id: integer(int64)
Minimum Value:
0gene row ID
Query Parameters
-
limit(optional): integer(int32)
Number of rows to return
-
offset(optional): integer(int32)
Row number to start from
Security
-
basicAuth: basic
Type:
basic
Response
Supported Media Types
- application/json
- application/xml
200 Response
successful operation
Root Schema : PageableCollection
Type:
objectModel for paginated collections of data.
Show Source
-
count(optional):
integer(int64)
Number of objects in the 'items' collection.
-
hasMore(optional):
boolean
A boolean indicating if more pages are available.
-
items(optional):
array items
A collection of paged items.
-
links(optional):
array links
A collection of links containing hrefs to the current, next, and previous pages as applicable.
-
resourceType(optional):
string
Identify the resource type
Nested Schema : links
Type:
arrayA collection of links containing hrefs to the current, next, and previous pages as applicable.
Show Source
Example:
{rel: 'next',href: '/patientapi/patients?limit=100&offset=300'}Nested Schema : Serializable
Type:
object400 Response
Invalid parameters supplied
404 Response
Gene intron component(s) not found
Examples
The following example submits a GET request.
API URL
http://localhost:7010/ohfapi/cg/v3.3/genes/50259/components/intron
Example of Response Body
The following example shows the contents of the response body in JSON format:
{
"resourceType": "GeneComponents",
"items": [
{
"identifier": {
"system": "ODB",
"value": "225732"
},
"geneName": "ENSG00000146648",
"ensemblVersion": "GRCH37.75",
"componentSource": {
"componentType": [
{
"componentName": "intron",
"componentId": 1193256,
"genomicPosition": [
{
"chromosome": "7",
"startPosition": 55087059,
"endPosition": 55209978,
"strand": "+",
"numberInSequence": 1
},
{
"chromosome": "7",
"startPosition": 55269476,
"endPosition": 55270209,
"strand": "+",
"numberInSequence": 25
},
{
"chromosome": "7",
"startPosition": 55269049,
"endPosition": 55269427,
"strand": "+",
"numberInSequence": 24
},
{
"chromosome": "7",
"startPosition": 55268107,
"endPosition": 55268880,
"strand": "+",
"numberInSequence": 23
},
{
"chromosome": "7",
"startPosition": 55266557,
"endPosition": 55268008,
"strand": "+",
"numberInSequence": 22
},
{
"chromosome": "7",
"startPosition": 55260535,
"endPosition": 55266409,
"strand": "+",
"numberInSequence": 21
},
{
"chromosome": "7",
"startPosition": 55259568,
"endPosition": 55260458,
"strand": "+",
"numberInSequence": 20
},
{
"chromosome": "7",
"startPosition": 55249172,
"endPosition": 55259411,
"strand": "+",
"numberInSequence": 19
},
{
"chromosome": "7",
"startPosition": 55242514,
"endPosition": 55248985,
"strand": "+",
"numberInSequence": 18
},
{
"chromosome": "7",
"startPosition": 55241737,
"endPosition": 55242414,
"strand": "+",
"numberInSequence": 17
},
{
"chromosome": "7",
"startPosition": 55240818,
"endPosition": 55241613,
"strand": "+",
"numberInSequence": 16
},
{
"chromosome": "7",
"startPosition": 55238907,
"endPosition": 55240675,
"strand": "+",
"numberInSequence": 15
},
{
"chromosome": "7",
"startPosition": 55233131,
"endPosition": 55238867,
"strand": "+",
"numberInSequence": 14
},
{
"chromosome": "7",
"startPosition": 55231517,
"endPosition": 55232972,
"strand": "+",
"numberInSequence": 13
},
{
"chromosome": "7",
"startPosition": 55229325,
"endPosition": 55231425,
"strand": "+",
"numberInSequence": 12
},
{
"chromosome": "7",
"startPosition": 55228032,
"endPosition": 55229191,
"strand": "+",
"numberInSequence": 11
},
{
"chromosome": "7",
"startPosition": 55225447,
"endPosition": 55227831,
"strand": "+",
"numberInSequence": 10
},
{
"chromosome": "7",
"startPosition": 55224526,
"endPosition": 55225355,
"strand": "+",
"numberInSequence": 9
},
{
"chromosome": "7",
"startPosition": 55224353,
"endPosition": 55224451,
"strand": "+",
"numberInSequence": 8
},
{
"chromosome": "7",
"startPosition": 55223640,
"endPosition": 55224225,
"strand": "+",
"numberInSequence": 7
},
{
"chromosome": "7",
"startPosition": 55221846,
"endPosition": 55223522,
"strand": "+",
"numberInSequence": 6
},
{
"chromosome": "7",
"startPosition": 55220358,
"endPosition": 55221703,
"strand": "+",
"numberInSequence": 5
},
{
"chromosome": "7",
"startPosition": 55219056,
"endPosition": 55220238,
"strand": "+",
"numberInSequence": 4
},
{
"chromosome": "7",
"startPosition": 55211182,
"endPosition": 55218986,
"strand": "+",
"numberInSequence": 3
},
{
"chromosome": "7",
"startPosition": 55210131,
"endPosition": 55210997,
"strand": "+",
"numberInSequence": 2
}
]
}
]
},
"geneReference": {
"reference": "/ohfapi/cg/v3.3/genes/50259"
}
},
{
"identifier": {
"system": "ODB",
"value": "225733"
},
"geneName": "ENSG00000146648",
"ensemblVersion": "GRCH37.75",
"componentSource": {
"componentType": [
{
"componentName": "intron",
"componentId": 1193258,
"genomicPosition": [
{
"chromosome": "7",
"startPosition": 55087059,
"endPosition": 55209978,
"strand": "+",
"numberInSequence": 1
},
{
"chromosome": "7",
"startPosition": 55233131,
"endPosition": 55236215,
"strand": "+",
"numberInSequence": 15
},
{
"chromosome": "7",
"startPosition": 55231517,
"endPosition": 55232972,
"strand": "+",
"numberInSequence": 14
},
{
"chromosome": "7",
"startPosition": 55229325,
"endPosition": 55231425,
"strand": "+",
"numberInSequence": 13
},
{
"chromosome": "7",
"startPosition": 55228032,
"endPosition": 55229191,
"strand": "+",
"numberInSequence": 12
},
{
"chromosome": "7",
"startPosition": 55225447,
"endPosition": 55227831,
"strand": "+",
"numberInSequence": 11
},
{
"chromosome": "7",
"startPosition": 55224526,
"endPosition": 55225355,
"strand": "+",
"numberInSequence": 10
},
{
"chromosome": "7",
"startPosition": 55224353,
"endPosition": 55224451,
"strand": "+",
"numberInSequence": 9
},
{
"chromosome": "7",
"startPosition": 55223640,
"endPosition": 55224225,
"strand": "+",
"numberInSequence": 8
},
{
"chromosome": "7",
"startPosition": 55221846,
"endPosition": 55223522,
"strand": "+",
"numberInSequence": 7
},
{
"chromosome": "7",
"startPosition": 55220358,
"endPosition": 55221703,
"strand": "+",
"numberInSequence": 6
},
{
"chromosome": "7",
"startPosition": 55219056,
"endPosition": 55220238,
"strand": "+",
"numberInSequence": 5
},
{
"chromosome": "7",
"startPosition": 55214434,
"endPosition": 55218986,
"strand": "+",
"numberInSequence": 4
},
{
"chromosome": "7",
"startPosition": 55211182,
"endPosition": 55214298,
"strand": "+",
"numberInSequence": 3
},
{
"chromosome": "7",
"startPosition": 55210131,
"endPosition": 55210997,
"strand": "+",
"numberInSequence": 2
}
]
}
]
},
"geneReference": {
"reference": "/ohfapi/cg/v3.3/genes/50259"
}
},
{
"identifier": {
"system": "ODB",
"value": "225735"
},
"geneName": "ENSG00000146648",
"ensemblVersion": "GRCH37.75",
"componentSource": {
"componentType": [
{
"componentName": "intron",
"componentId": 1193262,
"genomicPosition": [
{
"chromosome": "7",
"startPosition": 55087059,
"endPosition": 55209978,
"strand": "+",
"numberInSequence": 1
},
{
"chromosome": "7",
"startPosition": 55233131,
"endPosition": 55237999,
"strand": "+",
"numberInSequence": 15
},
{
"chromosome": "7",
"startPosition": 55231517,
"endPosition": 55232972,
"strand": "+",
"numberInSequence": 14
},
{
"chromosome": "7",
"startPosition": 55229325,
"endPosition": 55231425,
"strand": "+",
"numberInSequence": 13
},
{
"chromosome": "7",
"startPosition": 55228032,
"endPosition": 55229191,
"strand": "+",
"numberInSequence": 12
},
{
"chromosome": "7",
"startPosition": 55225447,
"endPosition": 55227831,
"strand": "+",
"numberInSequence": 11
},
{
"chromosome": "7",
"startPosition": 55224526,
"endPosition": 55225355,
"strand": "+",
"numberInSequence": 10
},
{
"chromosome": "7",
"startPosition": 55224353,
"endPosition": 55224451,
"strand": "+",
"numberInSequence": 9
},
{
"chromosome": "7",
"startPosition": 55223640,
"endPosition": 55224225,
"strand": "+",
"numberInSequence": 8
},
{
"chromosome": "7",
"startPosition": 55221846,
"endPosition": 55223522,
"strand": "+",
"numberInSequence": 7
},
{
"chromosome": "7",
"startPosition": 55220358,
"endPosition": 55221703,
"strand": "+",
"numberInSequence": 6
},
{
"chromosome": "7",
"startPosition": 55219056,
"endPosition": 55220238,
"strand": "+",
"numberInSequence": 5
},
{
"chromosome": "7",
"startPosition": 55214434,
"endPosition": 55218986,
"strand": "+",
"numberInSequence": 4
},
{
"chromosome": "7",
"startPosition": 55211182,
"endPosition": 55214298,
"strand": "+",
"numberInSequence": 3
},
{
"chromosome": "7",
"startPosition": 55210131,
"endPosition": 55210997,
"strand": "+",
"numberInSequence": 2
}
]
}
]
},
"geneReference": {
"reference": "/ohfapi/cg/v3.3/genes/50259"
}
},
{
"identifier": {
"system": "ODB",
"value": "225738"
},
"geneName": "ENSG00000146648",
"ensemblVersion": "GRCH37.75",
"componentSource": {
"componentType": [
{
"componentName": "intron",
"componentId": 1193268,
"genomicPosition": [
{
"chromosome": "7",
"startPosition": 55087059,
"endPosition": 55209978,
"strand": "+",
"numberInSequence": 1
},
{
"chromosome": "7",
"startPosition": 55224353,
"endPosition": 55224451,
"strand": "+",
"numberInSequence": 9
},
{
"chromosome": "7",
"startPosition": 55223640,
"endPosition": 55224225,
"strand": "+",
"numberInSequence": 8
},
{
"chromosome": "7",
"startPosition": 55221846,
"endPosition": 55223522,
"strand": "+",
"numberInSequence": 7
},
{
"chromosome": "7",
"startPosition": 55220358,
"endPosition": 55221703,
"strand": "+",
"numberInSequence": 6
},
{
"chromosome": "7",
"startPosition": 55219056,
"endPosition": 55220238,
"strand": "+",
"numberInSequence": 5
},
{
"chromosome": "7",
"startPosition": 55214434,
"endPosition": 55218986,
"strand": "+",
"numberInSequence": 4
},
{
"chromosome": "7",
"startPosition": 55211182,
"endPosition": 55214298,
"strand": "+",
"numberInSequence": 3
},
{
"chromosome": "7",
"startPosition": 55210131,
"endPosition": 55210997,
"strand": "+",
"numberInSequence": 2
}
]
}
]
},
"geneReference": {
"reference": "/ohfapi/cg/v3.3/genes/50259"
}
},
{
"identifier": {
"system": "ODB",
"value": "225743"
},
"geneName": "ENSG00000146648",
"ensemblVersion": "GRCH37.75",
"componentSource": {
"componentType": [
{
"componentName": "intron",
"componentId": 1193276,
"genomicPosition": [
{
"chromosome": "7",
"startPosition": 55087059,
"endPosition": 55209978,
"strand": "+",
"numberInSequence": 1
},
{
"chromosome": "7",
"startPosition": 55210131,
"endPosition": 55210997,
"strand": "+",
"numberInSequence": 2
},
{
"chromosome": "7",
"startPosition": 55211182,
"endPosition": 55214298,
"strand": "+",
"numberInSequence": 3
},
{
"chromosome": "7",
"startPosition": 55214434,
"endPosition": 55218986,
"strand": "+",
"numberInSequence": 4
},
{
"chromosome": "7",
"startPosition": 55219056,
"endPosition": 55220238,
"strand": "+",
"numberInSequence": 5
},
{
"chromosome": "7",
"startPosition": 55220358,
"endPosition": 55221703,
"strand": "+",
"numberInSequence": 6
},
{
"chromosome": "7",
"startPosition": 55221846,
"endPosition": 55223522,
"strand": "+",
"numberInSequence": 7
},
{
"chromosome": "7",
"startPosition": 55223640,
"endPosition": 55224225,
"strand": "+",
"numberInSequence": 8
},
{
"chromosome": "7",
"startPosition": 55224353,
"endPosition": 55224451,
"strand": "+",
"numberInSequence": 9
},
{
"chromosome": "7",
"startPosition": 55224526,
"endPosition": 55225355,
"strand": "+",
"numberInSequence": 10
},
{
"chromosome": "7",
"startPosition": 55225447,
"endPosition": 55227831,
"strand": "+",
"numberInSequence": 11
},
{
"chromosome": "7",
"startPosition": 55228032,
"endPosition": 55229191,
"strand": "+",
"numberInSequence": 12
},
{
"chromosome": "7",
"startPosition": 55229325,
"endPosition": 55231425,
"strand": "+",
"numberInSequence": 13
},
{
"chromosome": "7",
"startPosition": 55231517,
"endPosition": 55232972,
"strand": "+",
"numberInSequence": 14
},
{
"chromosome": "7",
"startPosition": 55233131,
"endPosition": 55238867,
"strand": "+",
"numberInSequence": 15
},
{
"chromosome": "7",
"startPosition": 55238907,
"endPosition": 55240675,
"strand": "+",
"numberInSequence": 16
},
{
"chromosome": "7",
"startPosition": 55240818,
"endPosition": 55241613,
"strand": "+",
"numberInSequence": 17
},
{
"chromosome": "7",
"startPosition": 55241737,
"endPosition": 55242414,
"strand": "+",
"numberInSequence": 18
},
{
"chromosome": "7",
"startPosition": 55242514,
"endPosition": 55248985,
"strand": "+",
"numberInSequence": 19
},
{
"chromosome": "7",
"startPosition": 55249172,
"endPosition": 55259411,
"strand": "+",
"numberInSequence": 20
},
{
"chromosome": "7",
"startPosition": 55259568,
"endPosition": 55260458,
"strand": "+",
"numberInSequence": 21
},
{
"chromosome": "7",
"startPosition": 55260535,
"endPosition": 55266409,
"strand": "+",
"numberInSequence": 22
},
{
"chromosome": "7",
"startPosition": 55266557,
"endPosition": 55268008,
"strand": "+",
"numberInSequence": 23
},
{
"chromosome": "7",
"startPosition": 55268107,
"endPosition": 55268880,
"strand": "+",
"numberInSequence": 24
},
{
"chromosome": "7",
"startPosition": 55269049,
"endPosition": 55269427,
"strand": "+",
"numberInSequence": 25
},
{
"chromosome": "7",
"startPosition": 55269476,
"endPosition": 55270209,
"strand": "+",
"numberInSequence": 26
},
{
"chromosome": "7",
"startPosition": 55270319,
"endPosition": 55272948,
"strand": "+",
"numberInSequence": 27
}
]
}
]
},
"geneReference": {
"reference": "/ohfapi/cg/v3.3/genes/50259"
}
},
{
"identifier": {
"system": "ODB",
"value": "225753"
},
"geneName": "ENSG00000146648",
"ensemblVersion": "GRCH37.75",
"componentSource": {
"componentType": [
{
"componentName": "intron",
"componentId": 1193294,
"genomicPosition": [
{
"chromosome": "7",
"startPosition": 55087059,
"endPosition": 55209978,
"strand": "+",
"numberInSequence": 1
},
{
"chromosome": "7",
"startPosition": 55224353,
"endPosition": 55224451,
"strand": "+",
"numberInSequence": 9
},
{
"chromosome": "7",
"startPosition": 55224526,
"endPosition": 55225355,
"strand": "+",
"numberInSequence": 10
},
{
"chromosome": "7",
"startPosition": 55225447,
"endPosition": 55227831,
"strand": "+",
"numberInSequence": 11
},
{
"chromosome": "7",
"startPosition": 55228032,
"endPosition": 55229191,
"strand": "+",
"numberInSequence": 12
},
{
"chromosome": "7",
"startPosition": 55229325,
"endPosition": 55231425,
"strand": "+",
"numberInSequence": 13
},
{
"chromosome": "7",
"startPosition": 55231517,
"endPosition": 55232972,
"strand": "+",
"numberInSequence": 14
},
{
"chromosome": "7",
"startPosition": 55233131,
"endPosition": 55238867,
"strand": "+",
"numberInSequence": 15
},
{
"chromosome": "7",
"startPosition": 55238907,
"endPosition": 55240538,
"strand": "+",
"numberInSequence": 16
},
{
"chromosome": "7",
"startPosition": 55240622,
"endPosition": 55323946,
"strand": "+",
"numberInSequence": 17
}
]
}
]
},
"geneReference": {
"reference": "/ohfapi/cg/v3.3/genes/50259"
}
}
],
"count": 6,
"hasMore": false,
"links": [
{
"rel": "self",
"href": "http://localhost:7010/ohfapi/cg/v3.3/genes/50259/components/intron"
}
]
}