Retrieve Intron Components for a Gene Identifier
get
/ohfapi/cg/v3.3/genes/{id}/components/intron
This endpoint supports the retrieval of intron Components for a Gene Row ID passed. It returns all intron Component information like Gene Name, Ensembl Version, Transcript Identifier, Component Name, Component Identifier, Genomic Positions, Strand and other Intron Component associated information. The 'Count' value displayed in the API represents the count of unique Gene Structure Identifiers
Request
Supported Media Types
- application/json
- application/xml
Path Parameters
-
id: integer(int64)
Minimum Value:
0
gene row ID
Query Parameters
-
limit(optional): integer(int32)
Number of rows to return
-
offset(optional): integer(int32)
Row number to start from
Security
-
basicAuth: basic
Type:
basic
Response
Supported Media Types
- application/json
- application/xml
200 Response
successful operation
Root Schema : PageableCollection
Type:
object
Model for paginated collections of data.
Show Source
-
count(optional):
integer(int64)
Number of objects in the 'items' collection.
-
hasMore(optional):
boolean
A boolean indicating if more pages are available.
-
items(optional):
array items
A collection of paged items.
-
links(optional):
array links
A collection of links containing hrefs to the current, next, and previous pages as applicable.
-
resourceType(optional):
string
Identify the resource type
Nested Schema : links
Type:
array
A collection of links containing hrefs to the current, next, and previous pages as applicable.
Show Source
Example:
{rel: 'next',href: '/patientapi/patients?limit=100&offset=300'}
Nested Schema : Serializable
Type:
object
400 Response
Invalid parameters supplied
404 Response
Gene intron component(s) not found
Examples
The following example submits a GET request.
API URL
http://localhost:7010/ohfapi/cg/v3.3/genes/50259/components/intron
Example of Response Body
The following example shows the contents of the response body in JSON format:
{ "resourceType": "GeneComponents", "items": [ { "identifier": { "system": "ODB", "value": "225732" }, "geneName": "ENSG00000146648", "ensemblVersion": "GRCH37.75", "componentSource": { "componentType": [ { "componentName": "intron", "componentId": 1193256, "genomicPosition": [ { "chromosome": "7", "startPosition": 55087059, "endPosition": 55209978, "strand": "+", "numberInSequence": 1 }, { "chromosome": "7", "startPosition": 55269476, "endPosition": 55270209, "strand": "+", "numberInSequence": 25 }, { "chromosome": "7", "startPosition": 55269049, "endPosition": 55269427, "strand": "+", "numberInSequence": 24 }, { "chromosome": "7", "startPosition": 55268107, "endPosition": 55268880, "strand": "+", "numberInSequence": 23 }, { "chromosome": "7", "startPosition": 55266557, "endPosition": 55268008, "strand": "+", "numberInSequence": 22 }, { "chromosome": "7", "startPosition": 55260535, "endPosition": 55266409, "strand": "+", "numberInSequence": 21 }, { "chromosome": "7", "startPosition": 55259568, "endPosition": 55260458, "strand": "+", "numberInSequence": 20 }, { "chromosome": "7", "startPosition": 55249172, "endPosition": 55259411, "strand": "+", "numberInSequence": 19 }, { "chromosome": "7", "startPosition": 55242514, "endPosition": 55248985, "strand": "+", "numberInSequence": 18 }, { "chromosome": "7", "startPosition": 55241737, "endPosition": 55242414, "strand": "+", "numberInSequence": 17 }, { "chromosome": "7", "startPosition": 55240818, "endPosition": 55241613, "strand": "+", "numberInSequence": 16 }, { "chromosome": "7", "startPosition": 55238907, "endPosition": 55240675, "strand": "+", "numberInSequence": 15 }, { "chromosome": "7", "startPosition": 55233131, "endPosition": 55238867, "strand": "+", "numberInSequence": 14 }, { "chromosome": "7", "startPosition": 55231517, "endPosition": 55232972, "strand": "+", "numberInSequence": 13 }, { "chromosome": "7", "startPosition": 55229325, "endPosition": 55231425, "strand": "+", "numberInSequence": 12 }, { "chromosome": "7", "startPosition": 55228032, "endPosition": 55229191, "strand": "+", "numberInSequence": 11 }, { "chromosome": "7", "startPosition": 55225447, "endPosition": 55227831, "strand": "+", "numberInSequence": 10 }, { "chromosome": "7", "startPosition": 55224526, "endPosition": 55225355, "strand": "+", "numberInSequence": 9 }, { "chromosome": "7", "startPosition": 55224353, "endPosition": 55224451, "strand": "+", "numberInSequence": 8 }, { "chromosome": "7", "startPosition": 55223640, "endPosition": 55224225, "strand": "+", "numberInSequence": 7 }, { "chromosome": "7", "startPosition": 55221846, "endPosition": 55223522, "strand": "+", "numberInSequence": 6 }, { "chromosome": "7", "startPosition": 55220358, "endPosition": 55221703, "strand": "+", "numberInSequence": 5 }, { "chromosome": "7", "startPosition": 55219056, "endPosition": 55220238, "strand": "+", "numberInSequence": 4 }, { "chromosome": "7", "startPosition": 55211182, "endPosition": 55218986, "strand": "+", "numberInSequence": 3 }, { "chromosome": "7", "startPosition": 55210131, "endPosition": 55210997, "strand": "+", "numberInSequence": 2 } ] } ] }, "geneReference": { "reference": "/ohfapi/cg/v3.3/genes/50259" } }, { "identifier": { "system": "ODB", "value": "225733" }, "geneName": "ENSG00000146648", "ensemblVersion": "GRCH37.75", "componentSource": { "componentType": [ { "componentName": "intron", "componentId": 1193258, "genomicPosition": [ { "chromosome": "7", "startPosition": 55087059, "endPosition": 55209978, "strand": "+", "numberInSequence": 1 }, { "chromosome": "7", "startPosition": 55233131, "endPosition": 55236215, "strand": "+", "numberInSequence": 15 }, { "chromosome": "7", "startPosition": 55231517, "endPosition": 55232972, "strand": "+", "numberInSequence": 14 }, { "chromosome": "7", "startPosition": 55229325, "endPosition": 55231425, "strand": "+", "numberInSequence": 13 }, { "chromosome": "7", "startPosition": 55228032, "endPosition": 55229191, "strand": "+", "numberInSequence": 12 }, { "chromosome": "7", "startPosition": 55225447, "endPosition": 55227831, "strand": "+", "numberInSequence": 11 }, { "chromosome": "7", "startPosition": 55224526, "endPosition": 55225355, "strand": "+", "numberInSequence": 10 }, { "chromosome": "7", "startPosition": 55224353, "endPosition": 55224451, "strand": "+", "numberInSequence": 9 }, { "chromosome": "7", "startPosition": 55223640, "endPosition": 55224225, "strand": "+", "numberInSequence": 8 }, { "chromosome": "7", "startPosition": 55221846, "endPosition": 55223522, "strand": "+", "numberInSequence": 7 }, { "chromosome": "7", "startPosition": 55220358, "endPosition": 55221703, "strand": "+", "numberInSequence": 6 }, { "chromosome": "7", "startPosition": 55219056, "endPosition": 55220238, "strand": "+", "numberInSequence": 5 }, { "chromosome": "7", "startPosition": 55214434, "endPosition": 55218986, "strand": "+", "numberInSequence": 4 }, { "chromosome": "7", "startPosition": 55211182, "endPosition": 55214298, "strand": "+", "numberInSequence": 3 }, { "chromosome": "7", "startPosition": 55210131, "endPosition": 55210997, "strand": "+", "numberInSequence": 2 } ] } ] }, "geneReference": { "reference": "/ohfapi/cg/v3.3/genes/50259" } }, { "identifier": { "system": "ODB", "value": "225735" }, "geneName": "ENSG00000146648", "ensemblVersion": "GRCH37.75", "componentSource": { "componentType": [ { "componentName": "intron", "componentId": 1193262, "genomicPosition": [ { "chromosome": "7", "startPosition": 55087059, "endPosition": 55209978, "strand": "+", "numberInSequence": 1 }, { "chromosome": "7", "startPosition": 55233131, "endPosition": 55237999, "strand": "+", "numberInSequence": 15 }, { "chromosome": "7", "startPosition": 55231517, "endPosition": 55232972, "strand": "+", "numberInSequence": 14 }, { "chromosome": "7", "startPosition": 55229325, "endPosition": 55231425, "strand": "+", "numberInSequence": 13 }, { "chromosome": "7", "startPosition": 55228032, "endPosition": 55229191, "strand": "+", "numberInSequence": 12 }, { "chromosome": "7", "startPosition": 55225447, "endPosition": 55227831, "strand": "+", "numberInSequence": 11 }, { "chromosome": "7", "startPosition": 55224526, "endPosition": 55225355, "strand": "+", "numberInSequence": 10 }, { "chromosome": "7", "startPosition": 55224353, "endPosition": 55224451, "strand": "+", "numberInSequence": 9 }, { "chromosome": "7", "startPosition": 55223640, "endPosition": 55224225, "strand": "+", "numberInSequence": 8 }, { "chromosome": "7", "startPosition": 55221846, "endPosition": 55223522, "strand": "+", "numberInSequence": 7 }, { "chromosome": "7", "startPosition": 55220358, "endPosition": 55221703, "strand": "+", "numberInSequence": 6 }, { "chromosome": "7", "startPosition": 55219056, "endPosition": 55220238, "strand": "+", "numberInSequence": 5 }, { "chromosome": "7", "startPosition": 55214434, "endPosition": 55218986, "strand": "+", "numberInSequence": 4 }, { "chromosome": "7", "startPosition": 55211182, "endPosition": 55214298, "strand": "+", "numberInSequence": 3 }, { "chromosome": "7", "startPosition": 55210131, "endPosition": 55210997, "strand": "+", "numberInSequence": 2 } ] } ] }, "geneReference": { "reference": "/ohfapi/cg/v3.3/genes/50259" } }, { "identifier": { "system": "ODB", "value": "225738" }, "geneName": "ENSG00000146648", "ensemblVersion": "GRCH37.75", "componentSource": { "componentType": [ { "componentName": "intron", "componentId": 1193268, "genomicPosition": [ { "chromosome": "7", "startPosition": 55087059, "endPosition": 55209978, "strand": "+", "numberInSequence": 1 }, { "chromosome": "7", "startPosition": 55224353, "endPosition": 55224451, "strand": "+", "numberInSequence": 9 }, { "chromosome": "7", "startPosition": 55223640, "endPosition": 55224225, "strand": "+", "numberInSequence": 8 }, { "chromosome": "7", "startPosition": 55221846, "endPosition": 55223522, "strand": "+", "numberInSequence": 7 }, { "chromosome": "7", "startPosition": 55220358, "endPosition": 55221703, "strand": "+", "numberInSequence": 6 }, { "chromosome": "7", "startPosition": 55219056, "endPosition": 55220238, "strand": "+", "numberInSequence": 5 }, { "chromosome": "7", "startPosition": 55214434, "endPosition": 55218986, "strand": "+", "numberInSequence": 4 }, { "chromosome": "7", "startPosition": 55211182, "endPosition": 55214298, "strand": "+", "numberInSequence": 3 }, { "chromosome": "7", "startPosition": 55210131, "endPosition": 55210997, "strand": "+", "numberInSequence": 2 } ] } ] }, "geneReference": { "reference": "/ohfapi/cg/v3.3/genes/50259" } }, { "identifier": { "system": "ODB", "value": "225743" }, "geneName": "ENSG00000146648", "ensemblVersion": "GRCH37.75", "componentSource": { "componentType": [ { "componentName": "intron", "componentId": 1193276, "genomicPosition": [ { "chromosome": "7", "startPosition": 55087059, "endPosition": 55209978, "strand": "+", "numberInSequence": 1 }, { "chromosome": "7", "startPosition": 55210131, "endPosition": 55210997, "strand": "+", "numberInSequence": 2 }, { "chromosome": "7", "startPosition": 55211182, "endPosition": 55214298, "strand": "+", "numberInSequence": 3 }, { "chromosome": "7", "startPosition": 55214434, "endPosition": 55218986, "strand": "+", "numberInSequence": 4 }, { "chromosome": "7", "startPosition": 55219056, "endPosition": 55220238, "strand": "+", "numberInSequence": 5 }, { "chromosome": "7", "startPosition": 55220358, "endPosition": 55221703, "strand": "+", "numberInSequence": 6 }, { "chromosome": "7", "startPosition": 55221846, "endPosition": 55223522, "strand": "+", "numberInSequence": 7 }, { "chromosome": "7", "startPosition": 55223640, "endPosition": 55224225, "strand": "+", "numberInSequence": 8 }, { "chromosome": "7", "startPosition": 55224353, "endPosition": 55224451, "strand": "+", "numberInSequence": 9 }, { "chromosome": "7", "startPosition": 55224526, "endPosition": 55225355, "strand": "+", "numberInSequence": 10 }, { "chromosome": "7", "startPosition": 55225447, "endPosition": 55227831, "strand": "+", "numberInSequence": 11 }, { "chromosome": "7", "startPosition": 55228032, "endPosition": 55229191, "strand": "+", "numberInSequence": 12 }, { "chromosome": "7", "startPosition": 55229325, "endPosition": 55231425, "strand": "+", "numberInSequence": 13 }, { "chromosome": "7", "startPosition": 55231517, "endPosition": 55232972, "strand": "+", "numberInSequence": 14 }, { "chromosome": "7", "startPosition": 55233131, "endPosition": 55238867, "strand": "+", "numberInSequence": 15 }, { "chromosome": "7", "startPosition": 55238907, "endPosition": 55240675, "strand": "+", "numberInSequence": 16 }, { "chromosome": "7", "startPosition": 55240818, "endPosition": 55241613, "strand": "+", "numberInSequence": 17 }, { "chromosome": "7", "startPosition": 55241737, "endPosition": 55242414, "strand": "+", "numberInSequence": 18 }, { "chromosome": "7", "startPosition": 55242514, "endPosition": 55248985, "strand": "+", "numberInSequence": 19 }, { "chromosome": "7", "startPosition": 55249172, "endPosition": 55259411, "strand": "+", "numberInSequence": 20 }, { "chromosome": "7", "startPosition": 55259568, "endPosition": 55260458, "strand": "+", "numberInSequence": 21 }, { "chromosome": "7", "startPosition": 55260535, "endPosition": 55266409, "strand": "+", "numberInSequence": 22 }, { "chromosome": "7", "startPosition": 55266557, "endPosition": 55268008, "strand": "+", "numberInSequence": 23 }, { "chromosome": "7", "startPosition": 55268107, "endPosition": 55268880, "strand": "+", "numberInSequence": 24 }, { "chromosome": "7", "startPosition": 55269049, "endPosition": 55269427, "strand": "+", "numberInSequence": 25 }, { "chromosome": "7", "startPosition": 55269476, "endPosition": 55270209, "strand": "+", "numberInSequence": 26 }, { "chromosome": "7", "startPosition": 55270319, "endPosition": 55272948, "strand": "+", "numberInSequence": 27 } ] } ] }, "geneReference": { "reference": "/ohfapi/cg/v3.3/genes/50259" } }, { "identifier": { "system": "ODB", "value": "225753" }, "geneName": "ENSG00000146648", "ensemblVersion": "GRCH37.75", "componentSource": { "componentType": [ { "componentName": "intron", "componentId": 1193294, "genomicPosition": [ { "chromosome": "7", "startPosition": 55087059, "endPosition": 55209978, "strand": "+", "numberInSequence": 1 }, { "chromosome": "7", "startPosition": 55224353, "endPosition": 55224451, "strand": "+", "numberInSequence": 9 }, { "chromosome": "7", "startPosition": 55224526, "endPosition": 55225355, "strand": "+", "numberInSequence": 10 }, { "chromosome": "7", "startPosition": 55225447, "endPosition": 55227831, "strand": "+", "numberInSequence": 11 }, { "chromosome": "7", "startPosition": 55228032, "endPosition": 55229191, "strand": "+", "numberInSequence": 12 }, { "chromosome": "7", "startPosition": 55229325, "endPosition": 55231425, "strand": "+", "numberInSequence": 13 }, { "chromosome": "7", "startPosition": 55231517, "endPosition": 55232972, "strand": "+", "numberInSequence": 14 }, { "chromosome": "7", "startPosition": 55233131, "endPosition": 55238867, "strand": "+", "numberInSequence": 15 }, { "chromosome": "7", "startPosition": 55238907, "endPosition": 55240538, "strand": "+", "numberInSequence": 16 }, { "chromosome": "7", "startPosition": 55240622, "endPosition": 55323946, "strand": "+", "numberInSequence": 17 } ] } ] }, "geneReference": { "reference": "/ohfapi/cg/v3.3/genes/50259" } } ], "count": 6, "hasMore": false, "links": [ { "rel": "self", "href": "http://localhost:7010/ohfapi/cg/v3.3/genes/50259/components/intron" } ] }