Retrieve Diseases for a Gene Identifier
get
/ohfapi/cg/v3.3/genes/{id}/diseases
This endpoint supports the retrieval of Diseases for a Gene Row ID passed. It returns Disease information like Disease Name, Mutation Type, Curation Source, Confidence and other Disease associated information.
Request
Supported Media Types
- application/json
- application/xml
Path Parameters
-
id: integer(int64)
Minimum Value:
0
gene row ID
Query Parameters
-
limit(optional): integer(int32)
Number of rows to return
-
offset(optional): integer(int32)
Row number to start from
Security
-
basicAuth: basic
Type:
basic
Response
Supported Media Types
- application/json
- application/xml
200 Response
successful operation
Root Schema : PageableCollection
Type:
object
Model for paginated collections of data.
Show Source
-
count(optional):
integer(int64)
Number of objects in the 'items' collection.
-
hasMore(optional):
boolean
A boolean indicating if more pages are available.
-
items(optional):
array items
A collection of paged items.
-
links(optional):
array links
A collection of links containing hrefs to the current, next, and previous pages as applicable.
-
resourceType(optional):
string
Identify the resource type
Nested Schema : links
Type:
array
A collection of links containing hrefs to the current, next, and previous pages as applicable.
Show Source
Example:
{rel: 'next',href: '/patientapi/patients?limit=100&offset=300'}
Nested Schema : Serializable
Type:
object
400 Response
Invalid parameters supplied
404 Response
Disease(s) not found
Examples
The following example submits a GET request.
API URL
http://localhost:7010/ohfapi/cg/v3.3/genes/50259/diseases
Example of Response Body
The following example shows the contents of the response body in JSON format:
{ "resourceType": "DiseaseGenes", "items": [ { "diseaseName": "Squamous cell carcinoma of head & neck", "mutationType": "M", "variantType": "DM?", "confidence": "Low", "curationSource": "BIOBASE", "ensemblVersion": "GRCH37.75", "geneRef": { "reference": "/ohfapi/cg/v3.3/genes/50259" } }, { "diseaseName": "Breast cancer%2C association with", "mutationType": "M", "variantType": "DP", "confidence": "High", "curationSource": "BIOBASE", "ensemblVersion": "GRCH37.75", "geneRef": { "reference": "/ohfapi/cg/v3.3/genes/50259" } }, { "diseaseName": "Lung cancer%2C association with", "mutationType": "M,E", "variantType": "DP", "confidence": "High", "curationSource": "BIOBASE", "ensemblVersion": "GRCH37.75", "geneRef": { "reference": "/ohfapi/cg/v3.3/genes/50259" } }, { "diseaseName": "Glioblastoma%2C risk%2C association with", "mutationType": "R", "variantType": "DFP", "confidence": "High", "curationSource": "BIOBASE", "ensemblVersion": "GRCH37.75", "geneRef": { "reference": "/ohfapi/cg/v3.3/genes/50259" } }, { "diseaseName": "Lung cancer%2C susceptibility to", "mutationType": "M", "variantType": "DM", "confidence": "High", "curationSource": "BIOBASE", "ensemblVersion": "GRCH37.75", "geneRef": { "reference": "/ohfapi/cg/v3.3/genes/50259" } }, { "diseaseName": "Altered transmembrane signaling", "mutationType": "M", "variantType": "DFP", "confidence": "High", "curationSource": "BIOBASE", "ensemblVersion": "GRCH37.75", "geneRef": { "reference": "/ohfapi/cg/v3.3/genes/50259" } }, { "diseaseName": "Lung cancer", "mutationType": "M", "variantType": "DM,DM?", "confidence": "High,Low", "curationSource": "BIOBASE", "ensemblVersion": "GRCH37.75", "geneRef": { "reference": "/ohfapi/cg/v3.3/genes/50259" } }, { "diseaseName": "Bladder cancer%2C association with", "mutationType": "R", "variantType": "DFP", "confidence": "High", "curationSource": "BIOBASE", "ensemblVersion": "GRCH37.75", "geneRef": { "reference": "/ohfapi/cg/v3.3/genes/50259" } }, { "diseaseName": "Reduced transcription", "mutationType": "E", "variantType": "FP", "confidence": "High", "curationSource": "BIOBASE", "ensemblVersion": "GRCH37.75", "geneRef": { "reference": "/ohfapi/cg/v3.3/genes/50259" } } ], "count": 9, "hasMore": false, "links": [ { "rel": "self", "href": "http://localhost:7010/ohfapi/cg/v3.3/genes/50259/diseases" } ] }