trc-bioinformatician-group
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- Can download files that have a link stored in Oracle Healthcare Omics (OHO, formerly known as Oracle Data Banks) and can be located in the middle tier in an
accessible location.
- Cannot build new reports or modify the content of existing reports.
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- Cohort Query Tab
- Cohort Query Tab: Genomic Data (tab in accordion)
- Query Tab: Relative Time Events: gene variant (radio button)
- Cohort Viewer (top tab)
- Cohort Viewer: Cohort List
- Cohort Viewer: Cohort Timeline
- Cohort Reports
- Cohort Viewer: Genomic Data Export
- Single Patient Viewer: View Record
- Single Patient Viewer: View Record: Genomic Data Collected
- Circular Genomic Viewer (Visquick)
- Genomic Query
- Genomic Query: Columns after searching for gene/variant coming from CDM (Patient
Count, Specimen Anatomical Site columns)
- My Workspace: My Recent Queries
- My Cohort Lists
- Queries or Lists shared with me
- Queries or Lists shared with All
- My Queries
- Gene Sets
- Manage Gene Sets
- Jobs
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trc-cohort-group
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- Can query any data from CDM but cannot query OHO directly.
- Can export the clinical data in a supported format and view the Dashboard.
- Cannot build new reports or modify the content of existing reports.
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- Cohort Query Tab
- Cohort Query Tab: Relative Time Events: gene variant (radio button)
- Cohort Viewer (top tab)
- Cohort Viewer: Cohort List
- Cohort Viewer: Cohort Timeline
- Single Patient Viewer: View Record
- My Workspace: My Recent Queries
- Short Cuts
- My Cohort Lists
- Queries or Lists shared with me
- Queries or Lists shared with All
- My Queries
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trc-limited-user-group
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- Can view the patient count on the Query Patients page
- Cannot build new reports or modify the content of existing reports.
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- Cohort Query Tab (Save Query button is not accessible)
- My Workspace: My Recent Queries
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trc-omics-group
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- Can query and read data from OHO
- Can export omics data in file formats readable by genome viewers. For example, VCF,
SEG, RES formats for IGV.
- Cannot build new reports or modify the content of existing reports.
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- Genomic Query
- My Workspace: My Recent Queries
- Short Cuts
- Gene Sets
- Jobs
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trc-comics-limited-user-group
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- Can query data from CDM and OHO using Query Patients interface
- Can only access Patient Genomic Data export within the Patient Viewer
interface
- Can create Gene Sets
- Can view queries and gene sets
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- Cohort Query Tab
- Cohort Query Tab: Genomic Data (tab in accordion)
- Query Tab: Relative Time Events: gene variant (radio button)
- Cohort Viewer (top tab)
- Cohort Viewer: Genomic Data Export
- My Workspace: My Recent Queries
- Gene Sets
- Jobs
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trc-pi-user-group
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- Has specific privileges allowing access to identifiable information on patients or
subjects
- In Subject context, can view merged version of Patient and Subject clinical data all
in one View Record page.
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- View personally identifiable (PI) information on the Cohort List page.
- View PI data in Single Patient or Subject Viewer, View Record page.
- Cohort Query Tab
- Cohort Query Tab: Genomic Data (tab in accordion)
- Query Tab: Relative Time Events: gene variant (radio button)
- Cohort Viewer (top tab)
- Cohort Viewer: Cohort List
- Cohort List (PI attributes)
- Cohort Viewer: Cohort Timeline
- Cohort Reports
- Cohort Viewer: Genomic Data Export
- Single Patient Viewer: View Record
- Single Patient Viewer: View Record (PI attributes)
- Single Subject Viewer: View Record (PI attributes)
- Single Subject Viewer: View Record (show patient data together)
- Single Patient Viewer: View Record: Genomic Data Collected
- Circular Genomic Viewer (Visquick)
- Genomic Query
- Genomic Query: Columns after searching for gene/variant coming from CDM (Patient
Count, Specimen Anatomical Site columns)
- My Workspace: My Recent Queries
- Short Cuts
- My Cohort Lists
- Queries or Lists shared with me
- Queries or Lists shared with All
- My Queries
- Gene Sets
- Saved Queries
- Jobs
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trc-admin-group
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- Can create user accounts and user groups for sharing cohort queries or lists
- Can add or remove users from groups
- Can manage user roles
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Manage User Group
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