Error Messages
The following table describes the different error messages for the Clinical Genomic APIs.
| Category | Error Message | Validation Logic/Error Condition |
|---|---|---|
| Variant APIs | Prediction Type supplied is not valid | Provide a valid Prediction Type |
| Prediction Code is either not valid or does not correspond to the Prediction Type | Check the Prediction code and Prediction Type supplied | |
| Genewid is not supplied | Provide Gene Identifier in the request | |
| Variant ReferenceId is not supplied | Provide Variant Reference ID in the request | |
| Alignment ID is not supplied | Provide Alignment ID in the request | |
| GeneComponent is not supplied | Provide Gene Component in the request | |
| Filter Variants input is not valid | Provide valid filter variant input in the request | |
| Prediction Comparator has been supplied but Prediction Score is not supplied | Provide Prediction Score in the request | |
| Prediction Score has been supplied but Prediction Comparator is not supplied | Provide Prediction Comparator in the request | |
| Either Prediction Score Value or Prediction Code Value is mandatory | Provide either Prediction Score or Prediction Code value in the request | |
| Permissible Prediction Score value is between 0.0 and 1.0 | Provide a valid Prediction Score value | |
| Unsupported Prediction Comparator supplied. Supported values are '>','<','=' | Provide a valid Prediction Comparator value | |
| Chromosome Value is not supplied | Provide Chromosome value in the request | |
| Chromosome Start Position is not supplied | Provide the Chromosome Start Position in the request | |
| Chromosome End Position is not supplied | Provide Chromosome End Position in the request | |
| Allele is not supplied | Provide Allele value in the request | |
| VariantEffect is not supplied | Provide Variant Effect in the request | |
| StartPosition value is higher than EndPosition value. Please provide valid values | Provide valid Start Position and End Position values in the request | |
| VariantEffect supplied is not valid | Provide a valid Variant Effect value in the request | |
| VariantWid is not supplied | Provide Variant Identifier in the request | |
| Invalid flanking offset supplied. It should be less than or equal to flanking offset in ODB. | Provide a valid Flanking offset in the request | |
| Invalid promoter offset supplied. It should be less than or equal to promoter offset in ODB. | Provide valid Promoter offset in the request | |
| Variants not found for the Chromosome and VariantEffect supplied | No Variants were found for Chromosome and Variant Effect supplied | |
| Variants not found for the Gene Wids and VariantEffect supplied | No Variant was found for the Gene Identifiers and Variant Effect supplied | |
| Variants not found for the Gene Wids and Prediction details supplied | No Variant was found for the Gene Identifiers and Prediction details supplied | |
| Variants not found for the Chromosome and Prediction details supplied | No Variant was found for the Chromosome and Prediction details supplied | |
| Variants not found for the Chromosome supplied | No Variant was found for the Chromosome supplied | |
| Variants not found for the Allele and Chromosome details supplied | No Variant was found for the Allele and Chromosome details supplied | |
| Variants not found for the Reference Ids and Reference Databases supplied | No Variant was found for Reference IDs and Reference Databases supplied | |
| Variants not found for the Gene Wids and geneComponents supplied | No Variant was found for Gene Identifiers and gene Components supplied | |
| Variants not found for the Gene Wids and component details supplied | No Variant was found for the Gene Identifiers and component details supplied | |
| Geneset APIs | Gene Set deleted | Gene set with the given ID has already been deleted |
| GeneSet with the given ID does not exist | Gene set with the given ID does not exist | |
| GeneSet with the given name already exist | Gene set with the given name does not exist | |
| All genes not found | None of the genes supplied in post body exist in the system | |
| Gene APIs | No valid genes found | No valid genes were found |
| Request does not contain ID list | Provide an ID list in the request | |
| Cohort List APIs | Cohort list with the given ID does not exist | Cohort list with the given ID does not exist |
| Cohort List with the given name already exists | Provide a different Cohort List name | |
| No valid patient or subject wids found | No valid patient or subject Identifiers were found | |
| Configuration APIs | Invalid configuration property name | Provide a valid configuration property name |
| Jersey Error Messages | Request parameter is not a valid number | The alphanumeric row ID supplied as a part of phenotype API URL |
| Invalid Id ${id} | Negative row IDs were supplied in pheynotype APIs | |
| Invalid Id list | The patient or subject row IDs has not been supplied in request parameter for any phenotype API | |
| Invalid offset value. Must be greater than 0. | The pagination param offset should be greater than 0. | |
| Invalid limit value. Must be greater than 0. | The pagination param limit should be greater than 0. | |
| No valid alignments found | The assemblies supplied in the request do not exist |
Export Definition APIs