Clinical Genomic APIs for Oracle Healthcare Foundation

Variant REST Endpoints

Genomic Reference/Variant

Retrieve Diseases for a Variant Identifier: Method: get
Path: /ohfapi/cg/v3.3/variants/{id}/diseases
Retrieve Variant Annotations for a Variant Identifier: Method: get
Path: /ohfapi/cg/v3.3/variants/{id}
Retrieve Variant Cancers for a Variant Identifier: Method: get
Path: /ohfapi/cg/v3.3/variants/{id}/cancer
Retrieve Variant Effects for a Variant Identifier: Method: get
Path: /ohfapi/cg/v3.3/variants/{id}/variantEffects
Retrieve Variant Predictions for a Variant Identifier: Method: get
Path: /ohfapi/cg/v3.3/variants/{id}/variantPredictions
Retrieve Variant References for a Variant Identifier: Method: get
Path: /ohfapi/cg/v3.3/variants/{id}/variantXRef
Retrieve Variants for Chromosome: Method: get
Path: /ohfapi/cg/v3.3/variants/byChromosome
Retrieve Variants for Chromosome and Allele: Method: get
Path: /ohfapi/cg/v3.3/variants/byChromosome/byAllele
Retrieve Variants for Gene Identifiers and Gene Components: Method: get
Path: /ohfapi/cg/v3.3/variants/byGeneComponents
Retrieve Variants for Prediction and Chromosome: Method: get
Path: /ohfapi/cg/v3.3/variants/byPrediction/byChromosome
Retrieve Variants for Prediction and Gene Identifiers: Method: get
Path: /ohfapi/cg/v3.3/variants/byPrediction/byGenewid
Retrieve Variants for Reference Identifiers and Database with GET Request: Method: get
Path: /ohfapi/cg/v3.3/variants/byReferenceId
Retrieve Variants for Reference Identifiers and Database with POST Request: Method: post
Path: /ohfapi/cg/v3.3/variants/byReferenceId
Retrieve Variants for Variant Effect and Chromosome: Method: get
Path: /ohfapi/cg/v3.3/variants/byEffect/byChromosome
Retrieve Variants for Variant Effect and Gene Identifiers: Method: get
Path: /ohfapi/cg/v3.3/variants/byEffect/byGenewid