The OHF Middle-Tier installs the following Web application:
Administration Console
The OHF Middle-Tier installs the following REST services:
Data Pipeline Service
File Upload Service
Clinical Genomics API
First, you must install the Middle-Tier on a primary node. This creates a WebLogic domain named oh_domain with a cluster named oh_cluster.
After you install the Middle-Tier on the primary node, you can optionally extend oh_cluster on secondary nodes, by running the installer on their corresponding machines.
This chapter contains the following sections:
Fusion Middleware Infrastructure is installed on the machine (see Software Requirements). | |
There is no WebLogic domain named "oh_domain" on the machine. | |
All the OHF Data Model schemas exist. | |
The Oracle external table DIRECTORY object is created for Omics Data Bank. | |
If you have already installed OHF 7.0.1 or 7.1 Middle-Tier components on WebLogic 12.1.3, uninstall the existing oh_domain and applications and install WebLogic 12.2.1.2. |
Extract the contents of the OHF media pack to your system. | |
Open the <media_pack_location>/ folder. | |
Unzip the OHF_721_Linux-x64.zip file where you want to launch the installer using the following command:
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Open the Disk1/install folder. | |
Change the protection on files as follows:
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Start the Oracle Universal Installer (OUI) by running the following command.
./runInstaller
Screen | Action | |
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Welcome | Click Next. | |
Select a Product to Install | Select the Oracle Healthcare Foundation Middle-Tier 7.2.1.0.0 option | |
Specify Home Details | Enter the Middle-Tier install home name and location. | |
Choose Install Type | Select Yes to perform a fresh installation. | |
Verify Install Prerequisites | Verify if all the prerequisites are met. | |
Java Home | Specify the JDK installation path. The installer validates this path. | |
Fusion Middleware Home | Specify the WebLogic with ADF installation path. The installer validates this path. | |
Cluster Configuration | Select Yes to create a domain and make the machine a primary node where the WebLogic AdminServer is located. | |
AdminServer Configuration | Enter values for the following fields:
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NodeManager Configuration | Enter values for the following fields:
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Managed Server Configuration | Enter values for the following fields:
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FMW Repository Creation Utility (RCU) Configuration | For Exadata or ASM groups, create the RCU schema outside the installer (see https://docs.oracle.com/middleware/1212/core/RCUUG/rcu.htm#RCUUG244 for details). While creating the RCU, select all MDS, IAU, IAU_APPEND, IAU_VIEWER, OPSS, UMS, WLS, and STB schemas.
The Fusion Middleware (FMW) RCU requires an Oracle Database user with DBA or SYSDBA privileges. Using the installer, you can create new RCU repositories, or use pre-created repositories using the WebLogic RCU utility.
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Oracle Healthcare Foundation Data Model Configuration - part 1 | Enter values for the following fields:
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Oracle Healthcare Foundation Data Model Configuration - part 2 | Enter values for the following fields:
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Oracle Healthcare Foundation Data Model Configuration - part 3 | Enter values for the following fields:
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Service Configuration |
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File Upload Service Configuration | Enter values for the following fields:
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Omics Loader Service Configuration | Enter values for the following fields:
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Summary | Click Install. | |
End of Installation | Click Exit after reviewing the installation information. At the confirmation prompt, click Yes to exit the installer. |
Check the log file located in ORACLE_BASE/oraInventory/logs. | |
Review the generated installation log files for errors. For details, see Middle-Tier Troubleshooting. | |
Contact Oracle support, if necessary, to resolve any errors. |
Make sure that the database compatible parameter is set to 12.2.0.1.0 by connecting to the DBA user and running the query below:
select * from v$parameter where name = 'compatible'; If the parameter is not set to 12.2.0.1.0, ask your database administrator to set it. |
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Fusion Middleware Infrastructure is installed on the machine in the same file system location as on the primary node. | |
There is no WebLogic domain named "oh_domain" on the machine. | |
All OHF Data Model schemas exist. | |
The Oracle external table DIRECTORY object is created for Omics Data Bank. |
Extract the contents of the OHF media pack to your secondary node system. | |
Open the <media_pack_location>/ folder. | |
Unzip the OHF_721_Linux-x64.zip file where you want to launch the installer using the following command:
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Open the Disk1/install folder. | |
Change the protection on files as follows:
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Start the Oracle Universal Installer (OUI) by running the following command.
./runInstaller -local
where, the -local
option is to install on the local node irrespective of the cluster nodes specified on the installer machine.
Follow the instructions below for each screen in the installation wizard:
Screen | Action | |
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Welcome | Click Next. | |
Select a Product to Install | Select the Oracle Healthcare Foundation Middle-Tier 7.2.1.0.0 option. | |
Specify Home Details | Enter the Middle-Tier install home name and location. | |
Choose Install Type | Select Yes to perform a fresh installation. | |
Verify Install Prerequisites | Verify if all the prerequisites are met. | |
Java Home | Specify the JDK installation path. The installer validates this path. | |
Fusion Middleware Home | Specify the WebLogic with ADF installation path. The installer validates this path. | |
Cluster Configuration | Select No to migrate an existing domain created by running this installer on the primary node to scale the cluster and add more machines to the domain. | |
AdminServer Configuration | Enter values for the following fields:
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NodeManager Configuration | Enter values for the following fields:
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Managed Server Configuration | Enter values for the following fields:
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Summary | Click Install. | |
End of Installation | Click Exit after reviewing the installation information. At the confirmation prompt, click Yes to exit the installer. |
Check the log file located in ORACLE_BASE/oraInventory/logs. | |
Review the generated installation log files for errors. For details, see Installation Log Files. | |
Contact Oracle support, if necessary, to resolve any errors. |