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Contents
Title and Copyright Information
Preface
Audience
User Documentation
Documentation Accessibility
1
Prepare to Install Oracle Thesaurus Management System
1.1
Check Installation Documentation
1.1.1
My Oracle Support Articles
1.1.2
User and Installation Documentation
1.2
Architecture
1.3
Network Topology
1.4
Software Requirements
1.4.1
Database Tier Operating System Requirements
1.5
Supported Configurations with Oracle Data Guard and RAC
1.5.1
Supported Configurations with Oracle Real Application Clusters (RAC)
1.5.1.1
Node 1: Install and Set Up Everything Required for Oracle Clinical
1.5.1.2
Node 2: Install the Minimum Required as a RAC Node
1.5.1.3
Node 3: Install Everything Required for Oracle Clinical as Backup
1.5.2
Supported Configurations with Oracle Data Guard
1.6
Download the Software
1.6.1
Create Staging Areas
1.6.2
Download the Oracle Thesaurus Management System 5.2.3.0.x Media Pack
1.6.3
Download Patches from My Oracle Support
1.6.4
Download Oracle Java Development Kit
1.6.5
Download the Java Runtime Environment
1.6.6
Download Adobe Reader
1.6.7
Download Oracle Critical Patch Updates
1.7
Use the Silent Installer (Optional)
1.8
Choose a Character Set
1.9
Download the Latest TMS Patches
1.10
Integrate TMS with Other Products and Options
1.10.1
Oracle Clinical Remote Data Capture Onsite
1.10.2
Oracle Clinical
1.10.3
Oracle Health Sciences Data Management Workbench and Oracle Life Sciences Data Hub
1.10.4
Custom Applications for TMS
2
Install Oracle Database
2.1
Get the Oracle Database 12.1.0 Installation Guide
2.2
Download and Extract the Oracle Database 12.1.0 Software
2.3
Performing Prerequisite Tasks for Installing Oracle Database
2.3.1
Create Owners, Groups, and Mount Points
2.3.2
Configure Kernel Resources and Adjust Operating System Environment
2.3.3
Install Latest Operating System Patches
2.4
Install Oracle Database 12.1.0
2.4.1
Install and Configure Oracle Database
2.4.2
Modify the tnsnames.ora File on the Database Server
2.4.3
Create the oinstall User Group
2.4.4
Check Required Tablespaces
2.4.5
Performance Tuning Step for Pluggable Databases
2.5
Install Oracle Database 12
c
Release 1 (12.1.0.2) Examples
2.6
Install Oracle Critical Patch Update
3
Install and Configure the Oracle Application Tier
3.1
Before You Start
3.1.1
Identify a Single Account to Perform All Application Tier Installation Tasks
3.1.2
Get a CA Certificate for HTTPS
3.1.3
Permanent IP Address
3.2
Gather Required Information
3.3
Install Adobe Reader
3.4
Install Oracle Java Development Kit
3.5
Install Oracle WebLogic Server 12.2.1.3
3.6
Install the Oracle Fusion Middleware Infrastructure Software
3.7
Install the Oracle Forms and Reports Servers
3.8
Create the Repository Creation Utility
3.9
Configure the FRDomain
3.9.1
Run ohs_updateInstances
3.10
Enable SSL Between a Browser and Oracle HTTP Server
3.10.1
Enable SSL Between a Browser and Oracle HTTP Server Using a Certificate Authority
3.10.1.1
Create an Oracle Wallet and Generate a Certificate Request
3.10.1.2
Obtain Trusted Certificate and User Certificate from Certificate Authority
3.10.1.3
Add the User Certificate and Trusted Certificate to an Oracle Wallet
3.10.1.4
Edit the Oracle HTTP Server Configuration File
3.10.2
Enable SSL Between a Browser and Oracle HTTP Server With Self Signing
3.10.2.1
Edit the Oracle HTTP Server Configuration File
3.11
Modify the tnsnames.ora File on the Application Server
3.12
Configure Firewall on the Application Tier
3.13
Test Connectivity to Databases for Forms and Reports Servers
3.13.1
Test the Connection from the Application Servers to the Database
3.13.2
Troubleshoot Network Connection Issues
3.14
Restart the Computer
4
Creating a TMS Database
4.1
Install the TMS Database Server
4.1.1
Gather Required Information
4.1.2
Start the TMS Server Installer
4.1.3
Attend to the TMS Database Server Code Installation Screens
4.2
Review Database Requirements and Recommendations
4.2.1
Start with a New Database Instance
4.2.2
Accept Connections as a Service
4.2.3
Check Required Tablespaces
4.2.4
Use the Database Configuration Assistant
4.2.5
Select Required Components
4.2.6
Use Automatic Memory Management
4.2.7
Set Initialization Parameters
4.3
Install TMS Database Objects
4.3.1
Unlock Accounts Before Installing the TMS Database
4.3.2
Gather Required Information
4.3.3
Stop the PSUB Process (If Integrated with Oracle Clinical)
4.3.4
Start the Installer
4.3.5
Attend to the TMS Database Installer Screens
4.3.6
Check the Database Log File
4.4
Create a TMS Administrator User Account
4.5
Register Databases Integrated with Oracle Clinical
4.5.1
Gather Required Information
4.5.2
Start the Installer
4.5.3
Attend to the TMS Database Registration Screens
4.6
Load Dictionaries
5
Installing Oracle Thesaurus Management System Application Components
5.1
Restart Computer and Stop All Servers
5.2
Installing the TMS Front End
5.2.1
Gather Required Information
5.2.2
Start the Installer
5.2.3
Attend to the TMS Front End Installer Screens
5.2.4
Find the Installation Log Files
5.2.5
Restart the Computer
5.2.6
Add WebLogic Data Sources If Using Multiple Databases
5.3
Make the Java Runtime Environment Available for Download
5.4
Installing the TMS Reports Server
5.4.1
Start the WebLogic FRDomain Admin Server
5.4.2
Gather Required Information
5.4.3
Start the TMS Report Server Installer
5.4.4
Attend to the TMS Reports Server Installation Screens
5.4.5
Review the Installation Log File
5.4.6
Start the TMS Report Server
5.5
Verifying the Application Tier Installation
5.6
Verify and Fix Environment Variables
5.6.1
Check Values
5.6.2
Correct Values
5.7
Set Up Automatic Startup
5.7.1
Create boot.properties
5.7.2
Increase the Delay for Auto Start OPADomain and FRDomain
5.7.3
Set Up Scripts to Execute Automatically at Machine Startup
5.7.4
Test Autostart
5.8
How to Start Servers Manually
5.8.1
Start the FRDomain Node Manager
5.8.2
Start the FRDomain Admin Server
5.8.3
Start the Forms Server
5.8.4
Start the Reports Server
5.8.5
Start the OPADomain Node Manager
5.8.6
Start the OPADomain Admin Server
5.8.7
Start the Managed Server of OPADomain
5.8.8
Start the OHS Server
5.8.9
Start the TMS Reports Server
5.9
Verify the Application Tier Installation
5.10
Stopping Servers
5.10.1
Stopping the Forms Server
5.10.2
Stopping the Reports Server
5.10.3
Stopping the FRDomain Admin Server
5.10.4
Stopping the OPADomain Admin Server
5.10.5
Stopping the Managed Server of OPADomain
6
Upgrading Oracle Thesaurus Management System to Release 5.2.3
6.1
Upgrade Oracle Clinical (If Integrated with Oracle Clinical)
6.2
Install Oracle Database
6.3
Upgrade and Configure the Application Tier Technology Stack
6.3.1
Before You Start
6.3.1.1
Identify a Single Account to Perform All Application Tier Installation Tasks
6.3.2
Gather Required Information
6.3.3
Restart Computer and Stop All Servers
6.3.4
Install Oracle Application Tier 12.2.1.3
6.3.5
Run Pre-Upgrade Readiness Check
6.3.6
Upgrade the Domain Schema
6.3.7
Run the Reconfiguration Wizard
6.3.8
Upgrade the Forms Server
6.4
Install the TMS Database Server Code
6.5
Upgrade a TMS Database
6.5.1
Prevent Access to Oracle Thesaurus Management System Databases
6.5.2
Upgrade to Oracle Database 12.1.0.2
6.5.2.1
Upgrade in Place
6.5.2.2
Clone Your Database
6.5.3
Gather Required Information
6.5.4
Stop PSUB Process (If Integrated with Oracle Clinical)
6.5.5
Start the Installer
6.5.6
Attend to the TMS Database Upgrade Installer Screens
6.5.7
Set Initialization Parameters
6.5.8
Check Installation Log for Errors
6.5.9
Configure DSI Import
6.5.10
Load Dictionaries
6.6
Upgrade Cloned Databases
6.7
Run Scripts to Gather Schema Statistics for the 12c Optimizer
6.8
Upgrade the TMS Front End
6.8.1
Gather Required Information
6.8.2
Start the Installer
6.8.3
Attend to the TMS Front End Installer Screens
6.8.4
Find the Installation Log Files
6.8.5
Set Remote Method Invocation (RMI) JDBC Security to Secure
6.9
Upgrade the TMS Reports Server
7
Post-Installation Steps for the New Installation or Upgrade
7.1
Patch TMS
7.2
Test the TMS Forms Server
7.3
Configure WebLogic Server Data Sources
7.3.1
Confirm the TMS Data Source Value in WebLogic Server Admin Console
7.3.2
Set REPORT_CONFIG Reference Codelist Value
7.3.3
Add Data Source (Required Only If Using Multiple Databases)
7.4
Making the Java Runtime Environment Available for Download
7.5
Create a Link to TMS HTML Browser
7.6
Configure Report Template File Size
7.7
Configure Report Template File Type
7.8
Configure the Document Repository
7.9
Define and Load Dictionaries
7.10
Setting Up Client Computers
7.10.1
Configure Personal Firewall
7.10.2
About Using Safari on an iPad
7.10.3
Set Internet Options for Microsoft Internet Explorer
7.10.3.1
Set Up for Proxy Usage on Fully Qualified Application Tier Names
7.10.3.2
Allow More Connections
7.10.3.3
Turn Off Compatibility View in Internet Explorer
7.10.4
Download Required Applications
7.10.4.1
Download the Java Runtime Environment
7.10.4.2
Download Adobe Reader
7.10.4.3
Download the Java Virtual Machine to Client Computers
7.10.5
Logging In
Index
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