Use Cases
Step through a typical use case using the OHTR REST API, as summarized in the following table.
This table summarizes a typical use case for using the OHTR REST API.
| Task | More Information |
|---|---|
| Identify Cohort and Extract Data | Identify a cohort of subjects and extract the clinical data for these patients |
| Retrieve Variant Data and Specimen Metadata | Retrieve variant data in VCF format for a cohort of patients and their specimen metadata |
| Retrieve Annotations for a Chromosome Region | Retrieve annotations for a chromosome region of interest |
| Annotate Mutations | Annotate important mutations with gene and function information |
| Extract Clinical Information and Save Cohort List | Extract clinical information using saved cohort list and then save cohort list for specific group patients |