Applying patch 5 to an SDK-only machine overwrites the samples makefiles.
Workaround: Applying patch 5 to an SDK-only machine does not require a reconfiguration; however, if you want to use the samples makefiles, follow these steps to update the LDIF and properties files (that is, perform tag swapping) for the samples makefiles:
Run the amconfig script with DEPLOY_LEVEL=14 to uninstall the SDK and unconfigure the web container.
Run the amconfig script with DEPLOY_LEVEL=4 to re-install the SDK and reconfigure the web container.