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Oracle® Health Sciences Translational Research Center User's Guide
Release 3.0.2.1
E35681-09
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2/15
List of Figures
1-1 Data Flow in TRC
2-1 Setting Context
2-2 Cohort Explorer
2-3 Manage User Groups
3-1 My Workspace Screen
3-2 Manage Queries
3-3 Manage Cohort Lists
3-4 Create New or Edit Gene Set
3-5 Manage Gene Set
3-6 Select Gene Set
3-7 Create and Schedule Job
3-8 Job Lists
3-9 Job Details
3-10 Job Inputs
3-11 Job Outputs
4-1 Inclusion and Exclusions
4-2 Demographics
4-3 Query Statement
4-4 Diagnosis
4-5 Patient Information Demographics options
4-6 Consent
4-7 Diagnosis
4-8 Clinical Encounter
4-9 Procedure
4-10 Medication
4-11 Patient History
4-12 Test or Observation
4-13 Specimen
4-14 Study Screen
4-15 Relative Time Events
4-16 Microarray Expression
4-17 Microarray Expression
4-18 Sequence Variants
4-19 Copy Number Variation - Numeric Based
4-20 Copy Number Variation - Categorized Based
4-21 RNA-seq Expression
4-22 Metadata Filters
4-23 Select Metadata Attributes
4-24 Patient Count
4-25 Criteria
4-26 Icons
4-27 Patient Count
4-28 Load Query
4-29 Save Query
5-1 Show Patients or Subjects
5-2 Cohort List
5-3 Selecting Patients or Subjects
5-4 Patient or Subject Pool
5-5 Selecting Data
5-6 Alternate Topic Area
5-7 Timelines
5-8 Align Data by Subject Event
5-9 Patient Node
5-10 Select Demographic
5-11 Demographics Report
5-12 Patient ID Source
5-13 Clinical Report
5-14 Select Source of Patient or Subject Identifiers
5-15 Show the Structural Variations
5-16 Popup
5-17 Select Source of Patient or Subject Identifiers
5-18 Show the Copy Number Variations
5-19 Select Source of Patient or Subject Identifiers
5-20 Show the Structural Variations
5-21 Select Source of Patient or Subject Identifiers
5-22 Show the Structural Variations
5-23 Genomic Data Export
5-24 Selecting results to export
5-25 Selecting Location
5-26 Selecting Gene
5-27 File Type to Export options
5-28 Export Options - Schedule Mode
6-1 View Record
6-2 Hide and Display Options
6-3 Variants Found
6-4 Selection Criteria
6-5 Specimen for Result Types
6-6 Circular Genomic Plot
7-1 Dashboard Page
8-1 Genomic Query
8-2 Gene Search
8-3 Variant Search