Use Cases

Step through a typical use case using the Clinical Genomic API, as summarized in the following table.

Task	More Information
Identify Cohort and Extract Data	Identify a cohort of subjects and extract the clinical data for these patients
Retrieve Variant Data and Specimen Metadata	Retrieve variant data in VCF format for a cohort of patients and their specimen metadata
Retrieve Annotations for a Chromosome Region	Retrieve annotations for a chromosome region of interest
Annotate Mutations	Annotate important mutations with gene and function information
Extract Clinical Information and Save Cohort List	Extract clinical information using saved cohort list and then save cohort list for specific group patients