Update the TRC.properties file
The TRC.properties
file contains configurable values used in the
user interface of the Oracle Healthcare Translational Research application. The TRC.properties
file is uploaded in the root
directory of the Oracle WebLogic Server
(<FMW_HOME>/user_projects/domains/oh_domain
,
where FMW_HOME is the home directory of Oracle Fusion Middleware).
Following are descriptions of the file properties.
Table 3-1 Properties in
TRC.properties
File
Property | User Interface | Description |
---|---|---|
SF_HOME |
View Record |
This corresponds to the location of the file system where the result files are stored. This should correspond to TRC_ODB_PERM Oracle directory object used when loading result files into the ODB schema. This location must have the necessary permissions to ensure that the Oracle WebLogic Server user can access this path and read from this location. |
MAX_FILE_SIZE |
View Record |
This corresponds to the maximum file size (in MB) that a user can download. |
PT_LIST.MAX_PATIENT_ID |
Cohort List |
This corresponds to the maximum number of patients or subjects that can be saved in the Cohort List. The maximum value that can be provided is 1000. |
GENOMIC.MAX_PATIENT_COUNT |
Genomic Data Export |
This corresponds to the maximum count of patients or subjects that can be selected for generating the genomic data. This is applicable for all the 3 options on selecting the patients (active query, library query and the ad-hoc patients). If the count of patients or subjects selected is more than this value, an error message is displayed when the Submit button is clicked. |
GENOMIC.REPORTS_MAX_PATIENT_COUNT |
Cohort Reports |
This corresponds to the maximum number of patients whose data can be viewed in the reports. This applies to all options of selecting the Patients/Subjects. If the count of patients or subjects selected is more than this value, a warning message is displayed. You can either continue to plot with a large number of patients/subjects, which might impact performance or change the selected cohort for a smaller number of patients / subjects. |
DEFAULT_ACTIVE_QUERY_LIMIT |
Cohort Reports |
This corresponds to the maximum number of patients /subjects whose data is plotted when the patient selection mode is Active Query, but the patients/subjects have not been filtered using the Cohort Query screen. If this count is exceeded, then an error message is displayed. |
MAX_SPEC_REPORT |
Cohort Reports |
This corresponds to the maximum number of specimens for which a sample matrix can be plotted. If the number of specimens exceeds this limit, then a warning message is shown and a summary report of genomic information is displayed. |
GENOMIC.MAX_GENE_COUNT |
Cohort Reports or Genomic Data Export |
This corresponds to the maximum count of Gene names that can be selected for generating genomic data. This applies to the Ad-hoc list Gene selection in the screen. If the count of Genes selected is more than this value, an error message is displayed when the Submit button is clicked. |
VARIANT_DISPLAY_LIMIT |
View Record |
This corresponds to the maximum number of records that can be retrieved from the database for displaying variant data. |
DEMOGRAPHICS_DISABLED |
Cohort Query |
Setting this value to True disables the Demographics criteria on the Cohort Query screen. |
CONSENT_DISABLED |
Cohort Query |
Setting this value to True disables the Consent criteria on the Cohort Query screen. |
DIAGNOSIS_DISABLED |
Cohort Query |
Setting this value to True disables the Diagnosis criteria on the Cohort Query screen. |
CLINICAL_ENCOUNTER_DISABLED |
Cohort Query |
Setting this value to True disables the Clinical Encounter criteria on the Cohort Query screen. |
PROCEDURE_DISABLED |
Cohort Query |
Setting this value to True disables the Procedure criteria on the Cohort Query screen. |
MEDICATION_DISABLED |
Cohort Query |
Setting this value to True disables the Medication criteria on the Cohort Query screen. |
PATIENT_HISTORY_DISABLED |
Cohort Query |
Setting this value to True disables the History criteria on the Cohort Query screen. |
TEST_OBSERVATION_DISABLED |
Cohort Query |
Setting this value to True disables the Test Or Observation criteria on the Cohort Query screen. |
SPECIMEN_DISABLED |
Cohort Query |
Setting this value to True disables the Specimen criteria on the Cohort Query screen. |
STUDY_DISABLED |
Cohort Query |
Setting this value to True disables the Study criteria on the Cohort Query screen. |
RELATIVE_TIME_EVENTS_DISABLED |
Cohort Query |
Setting this value to True disables the Relative Time Events criteria on the Cohort Query screen. |
SEQUENCE_VARIANTS_DISABLED |
Cohort Query |
Setting this value to True disables the Sequence Variants criteria on the Cohort Query screen. |
COPY_NUMBER_VARIATION_DISABLED |
Cohort Query |
Setting this value to True disables the Copy Number Variation criteria on the Cohort Query screen. |
MICROARRAY_EXPRESSION_DISABLED |
Cohort Query |
Setting this value to True disables the MicroArray Expression criteria on the Cohort Query screen. |
RNA_SEQ_EXPRESSION_DISABLED |
Cohort Query |
Setting this value to True disables the RNA Sequencing criteria on the Cohort Query screen. |
GENOMIC.CHROMOSOME_RANGE |
Genomic Query - Variant Search |
This corresponds to the maximum chromosome range that can be provided for searching variants using a Genomic Position in the variant search functionality of the Genomic Query. |
Parent topic: Install and configure the Middle Tier